Based on the information currently out there, here's what I believe will be on all versions of the deluxe:
Crystal Ballroom
Lucifer's Hands
The Troubles (Alternative Version)
Sleep Like a Baby Tonight (Tchad Blake Mix)
Invisible (IF the Fanning/Bono interview is to be believed)
Acoustic tracks (how many? that's a great question. One interview seemed to imply that there would be acoustic versions of every track on the album, but I doubt that will happen)
IN ADDITION, Billboard reported that there are three additional tracks set aside for retailer exclusives. So yes, Best Buy and maybe Target will get one or two additional tracks in addition to the above. I'm guessing there will be 6 or 7 acoustic songs on the basic deluxe, with three additional acoustic tracks divided between retailers. Hopefully we'll get a definitive answer soon!
Also, updated cover art: